To cite package ‘clockSim’ in publications use:

  Yuan Y (2025). _clockSim: Simulation of the Circadian Clock Gene
  Network_. R package version 0.0.0.9002,
  <https://github.com/yeyuan98/clocksim>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {clockSim: Simulation of the Circadian Clock Gene Network},
    author = {Ye Yuan},
    year = {2025},
    note = {R package version 0.0.0.9002},
    url = {https://github.com/yeyuan98/clocksim},
  }